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Image Search Results
Journal: Journal of Biological Chemistry
Article Title: Myb-binding Protein 1a (Mybbp1a) Regulates Levels and Processing of Pre-ribosomal RNA
doi: 10.1074/jbc.m111.303719
Figure Lengend Snippet: FIGURE 4. Mybbp1a is part of a RNA-sensitive protein complex. A, RNase A-treated and mock-treated (ctrl) HeLa nuclear extracts were separated on a Superose 6 gel filtration column. Load (9%), and collected fractions (every second fraction from 12 to 34) were analyzed by Western blotting with the indicated antibodies. B, nuclear extracts of HeLa cells either transfected with FLAG-Mybbp1a expression plasmid (lane 5–8) or control DNA (ctrl; lane 1–4) were incubated with -FLAG-agarose. Load (L; 5%), flow-through (FT; 5%), bead-bound (B), and eluted proteins (E) were analyzed by Western blotting with the indicated antibodies. C, polysome fractionation was performed on a sucrose gradient, and Mybbp1a and Pes1 protein levels of the fractions were detected by immu- noblotting. Pre-assembled ribosomal subunit, monosome, and polysome fractions were detected by measuring UV absorbance at 254 nm as indicated. D, nuclear extracts of HeLa cells either transfected with FLAG-Mybbp1a expression plasmid or control DNA (ctrl) were used for immunoprecipitation with -FLAG-agarose. Eluted protein fractions were separated by SDS-PAGE, silver-stained, and protein bands were cut and subjected to MALDI-TOF mass spec- trometry. Proteins identified are indicated, and their participation in ribosome biogenesis is summarized on the right. hnRNP, heterogeneous nuclear ribonucleoprotein.
Article Snippet: Antibodies—The following antibodies were used for Western blotting, ChIP, and immunostaining: rabbit polyclonal -RPA116 (30), rabbit polyclonal -PAF53 (34), and -TIF-IA (Ref. 35; kindly provided by I. Grummt), rabbit polyclonal -Mybbp1a (generated to a GST fusion protein containing amino acid residues 976–1263 of human Mybbp1a) and -mouse Mybbp1a (23), mouse monoclonal -FLAG (M2, Sigma), rabbit polyclonal -FLAG (Sigma), mouse monoclonal -tubulin (Dm1a, Sigma), rabbit polyclonal -RPA194 (sc28174, SantaCruzBiotechnology), -BrdU (RocheApplied Science), -
Techniques: Filtration, Western Blot, Transfection, Expressing, Plasmid Preparation, Control, Incubation, Fractionation, Immunoprecipitation, SDS Page, Staining, Mass Spectrometry